In the Arabidopsis thaliana regulatory element analyzer (AtREA) server, we have integrated sequence data, genome-wide expression data and functional annotation data in three application modules which will be useful to identify major regulatory targets of a user-provided cis-regulatory element (CRE), study different features of CRE distribution and evaluate the role of a set of CREs in the regulation of gene expression - independently as well as in combination with other user-provided CREs. © The Author 2008. Published by Oxford University Press. All rights reserved.

ANSUMAN LAHIRI

Bio-Physics, Molecular Biology and Bioinformatics

A CHOUDHURY

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University of Calcutta (informally known as Calcutta University or CU) is a collegiate public state university located in Kolkata, West Bengal, India.&nbsp;Within India it is recognized as a &quot;Five-Star University&quot; and accredited &quot;A&quot; Grade by National Assessment and Accreditation Council.

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The University of Calcutta has secured the Fifth position among the Universities of India in the prestigious &quot;Indian University Ranking 2019&quot; list, released by the NIRF of the Ministry of Human Resource Development, Government of India.

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It was established on 24 January 1857, and was one of the first institutions in Asia to be established as a multidisciplinary and Western-style university. Its alumni and faculty include several heads of state, heads of government, social reformers, prominent artists, only academy award winner and Dirac medal winner in India, many Fellows of the Royal Society and five Nobel laureates as of 2019 which is highest in South Asia.

University Of Calcutta

Bioinformatics

Nucleic Acids Research

MIPS: analysis and annotation of genome information in 2007

The Arabidopsis Information Resource (TAIR): gene structure and function annotation

AthaMap web tools for the analysis and identification of co-regulated genes

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis

Journal of Experimental Botany

Gene networks involved in drought stress response and tolerance

Arabidopsis thaliana regulatory element analyzer

Journal	Bioinformatics
Publisher	OXFORD UNIV PRESS
ISSN	1367-4803
Open Access	No